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Welcome to the Athena homepage |
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Pantheon provides visualization and data-mining of Arabidopsis thaliana promoter sequences.
Quick, one-step selection of genes is available with both of these tools.
For more in-depth investigation, we provide a wide array of analysis tools including and a suite of of analysis tools for
- Promoter visualization tool for inspection of promoter sequences
- Transcription factor binding site enrichment tool to identify statistically over-represented TF sites occurring in a selected set of promoters
- Data mining tools to select promoters based on TF binding sites, GO terms, and genome subsets
- Plot of position distribution of TF binding sites
- Search for promoters containing custom-defined motifs
- Cross-linked with ExpressionAngler to import sets of coregulated genes
- Cross-linked with Promomer to analyze promoter sequences for novel motifs:
BBC @ University of Toronto
Note: Javascript must be enabled for Athena to work
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Select a tool |
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Tutorial:
A step-by-step guide of how to use each of Athena's tools
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Visualization:
List accessions to visualize up to 100 promoter regions
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Data Mining:
Select sets of promoter sequences by common transcription factors or common Gene Ontology terms
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Analysis suite:
High-powered data mining, visualization, and our full suite of analysis tools
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Custom Motif Search:
Search for sets of promoters containing motifs not present in our database.
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